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mdbread
Cross-platform Python reader for MS Access filesfactor-graph
Belief propagation over factor graphs in directed & undirected PGMsnlptk
NLP utilities (NER, parsers, corpus readers), wrapped in Clojure.pkgbuild
Arch Linux PKGBUILDs, mostly for bioinformatics-related programs.ahocorasick
Fast string searching in various languages (Clojure, C++)GenomicRegions.jl
Julia package for handling sets of genomic regions, with in-memory and on-disk indexing capabilities.scet
Significantly Co-occurring Entities in Textpubmed-elasticsearch
lein-chronic
Schedule leiningen tasks for timed execution.gseconvert
Constructs and preprocesses a gene expression matrix from raw GSEs for use in meta-analysesseqsei
Functional prediction for genes & non-coding elementslitberator
Retrieve PDFs from a PubMed query stringxbxnotify
Notifies an e-mail address (for example, a SMS number's e-mail address) when friends sign on to Xbox Live.fun
Collection of small programs for fun & learningpcor
Parallel computation of all-vs-all Pearson correlationslein-condor
Parallelize Clojure on a Condor cluster.h5df
Library and CLI for storing numeric data frames in HDF5mrat
Methylated region analysis toolLove Open Source and this site? Check out how you can help us