ghislainv/jSDM

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Created almost 6 years ago
Updated over 1 year ago

ghislainv/jSDM

ghislainv

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📦 R package for joint species distribution models

forestatrisk

📦🐍 Python package to model and forecast the risk of deforestation

riskmapjnr

📦🐍 Mapping deforestation risk following JNR methodology

forestatrisk-tropics

🌍 📝 Modelling and forecasting deforestation in the tropics

hSDM

📦 R package for hierarchical Bayesian species distribution models

deforestation-maps-Mada

📝 Sixty years of deforestation and forest fragmentation in Madagascar

workshopReCaREDD

Scenarios of deforestation for tropical countries

Jupyter Notebook

gecevar

📦 🌎 ⛰️ ☀️ ☁️ 🌱 Get climatic and other environmental variables

pywdpa

📦 🐍 pywda Python package for simple access to world's protected areas

cv

Ghislain Vieilledent's curriculum vitae

ghislainv.github.io

Ghislain Vieilledent's website on ecology and applied statistics

MCMCpack-parallel

Parallel processes with MCMCpack

forestatrisk-tutorial

Tutorial to use the 'forestatrisk' Python package to model and forecast tropical deforestation

roads-osm

Extract African roads from OpenStreet Map

menabe

Deforestation in central Menabe, western Madagascar

carbonmap

Bioclimatic envelope models predict a decrease in tropical forest carbon stocks with climate change in Madagascar

JSDM-PyMC

Fitting joint species distribution models with PyMC

twoe

Estimating tree species demography and simulating forest dynamics

accuracy_NBR

Estimate accuracy of delta NBR for forest degradation

ExS-interactions

E x S interactions in high dimension explain species coexistence

docker-debian-jupyter

Docker with debian 8 and Jupyter notebook

docker-forestatrisk

Docker file for R, RStudio, reticulate, Python 3 and forestatrisk

forestatrisk-newcaledonia

Modelling and forecasting deforestation in New-Caledonia

Jupyter Notebook

speciesatlas

gorillas

🦍 🇨🇩 Estimating Grauer's gorilla distribution and population size in eastern Democratic Republic of the Congo

chelsafrica

African climate

clean-overlay-vectors

R/GRASS scripts to clean and overlay vector data

ghislainv

greta_test

Test of the greta R package

ghislainv.fr

Personal website

wood-density-Cirad

The Cirad wood density database

forestatrisk-Mada

Spatial modelling and forecasting of deforestation in Madagascar

JSDM-PyMC3

Fitting joint species distribution models with PyMC3

Jupyter Notebook

docker-deforestprob

Docker to run the Python deforestprob module

U-shape-tree-mortality-DBH

Fitting U shape tree mortality model with DBH

lifezones

Global bioclimatic scheme for the classification of land areas

useR-2019-tutorials

useR 2019 tutorials

ecoregions-mada

Plot Madagascar ecoregions

jrc-lidar-height-growth

geoprocessing-python

Various Python scripts for geoprocessing

docker-forestatrisk-tropics

🐳 Docker for the forestatrisk-tropics project

coexist

Theoretical high-dimensional model for species coexistence

presentations

📺 Oral presentations

Warton2015-TRENDS

Joint species distribution models from Warton et al. 2015 in Trends in Ecology & Evolution

Vieilledent2012-Ecological-Applications

R script and data for Vieilledent2012-Ecological-Applications

madaclim

Free climate and environmental data for Madagascar

forestatrisk-jupyter-notebook

Jupyer notebook for the `forestatrisk` Python package

Jupyter Notebook

forest-cover-percentage

Compute forest cover percentage at low resolution from a high resolution forest cover map

gdal2tiles-leaflet

Tiling big raster files to plot maps with leaflet

debian-install

Useful files to install GNU Linux Debian

FRB-reports-BioSceneMada

Reports for the FRB project BioSceneMada

box-cyclone-fire

Box for tropical cyclone-fire interaction in Madagascar

forecasting-deforestation-Mada

intraco

Reports and presentations for the INTRACO project