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MutationTimeR
An R package to time somatic mutationsSARS-CoV-2-International
International SARS-CoV-2 surveillanceAML-multistage
Code accompanying Precision oncology for acute myeloid leukemia using a knowledge bank approachBaSISS
Code for the "Spatial genomics maps the structure, nature and evolution of cancer clones" paperPCAWG-11
Code accompanying "The evolutionary history of 2,658 cancers", Nature 578, 122–128 (2020)deepSNV
The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.MDS-expression
R code for Combining gene mutation with gene expression data improves outcome prediction in myelodysplastic syndromesDelphi
sarscov2-b117
Spatiotemporal analysis of strain-specific B.1.1.7 SARS-CoV-2 infection dynamicspreAML
Code accompanying Prediction of AML risk in healthy individuals by Abelson, Collord, et al. (2018), Nature, 559:400-404BarrettsProgressionRisk
An R package to process and predict risk of adenocarcinoma progression from shallow whole-genome sequencing data.CHOCOLAT-G2P
ebmstate_paper_data_files
ebsurv
SARS-CoV-2-Germany
SARS-CoV-2 genomic surveillance in GermanyMPN-multistage
MPN multistage calculatorLove Open Source and this site? Check out how you can help us