genomicsclass/dagdata

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Created almost 10 years ago
Updated about 9 years ago

genomicsclass/dagdata

genomicsclass

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Data for the HarvardX courses: PH525x

Data package for the PH525x series

Instructors: try to avoid adding objects larger than 5 Mb. Large data objects can go in their own package (own repo).
.RData or .rda files go in data/.
Other files, csv, etc., go in inst/extdata/.

labs

Rmd source files for the HarvardX series PH525x

book

Compiled and pretty version of labs

windows

Guide to setting up R and RStudio on Windows

ph525x

ph525x. functions only, no data

leanpub

This is where our leanpub book will be

rawdata

colonCancerWGBS

Six paired tumor-normal WGBS samples from Ziller et al. (2013) PMID: 23925113. Only chr22.

old_dagdata

Some of the data sets for PH525x: Data Analysis for Genomics

tissuesGeneExpression

realbook

tcgaMethylationSubset

A subset of the DNA mehtylation data in TCGA

ERBS

Estrogen related receptor binding sites

GSE5859Subset