funkey/waterz

Stars
18
Rank 1,208,065 (Top 24 %)
Language
C++
Created about 8 years ago
Updated over 3 years ago

funkey/waterz

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Simple watershed and agglomeration library for affinity graphs.

recept

Pen event interception for line smoothing on the reMarkable 2 tablet

conv4d

4D Convolution Operator for TensorFlow

nyroglancer

jupyter notebook extension to visualize numpy arrays with the neuroglancer

mala

Training and evaluation scripts for MALA (https://arxiv.org/abs/1709.02974).

sopnet

neuron reconstruction pipeline

unproof

Script to unscramble proofpoint's urldefense URLs

pipeline

a simple to use C++ pipeline architecture

pylp

Unified python wrappers for popular ILP solvers

bmrm

Fork of the bmrm project (http://users.cecs.anu.edu.au/~chteo/BMRM.html) for structured learning on linearly constraint linear models.

skeletopyze

Simple python module for volume skeletonization.

util

handy things in here, needed by other modules

augment

Simple elastic augmentation for ND arrays

imageprocessing

general pipeline components used for image processing

solvers

Wrapper classes for Gurobi, CPLEX, and SCIP ILP and IQP solvers

cmake

module-based cmake build system

pymfast

Python solver for the minimal feedback arc set problem

ted

cohear

A simple and fast signalling library with automatic slot-callback association.

gui

general pipeline components for guis

signals

signalling backend for the pipeline module

aff_watershed

3D Watershed on Affinity Graph

resync

A FUSE client for the reMarkable tablet

flywing

Scripts to train and evaluate tracking of developing flywing cells

Jupyter Notebook

microtubules

caffe_luigi

luigi scripts to train and evaluate

pymatch

A simple python module to compute the Hungarian matching using an LP.

bad_ass

BAD Anisotropic Section Sanitizer

quemono

Learn to write a computer game in 88 days

candidate_mc

host

Higher Order Spanning Trees

tools

A volume viewer, an image viewer, and a skeleton viewer.

brembow_experiments

jAER

Java tools for Address-Event Representation (AER) neuromorphic processing.