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Hardware-Target-Game-Database
Flash-cart optimized file and folder layouts.swarm
A robust and fast clustering method for amplicon-based studiesstampa
Sequence Taxonomic Assignment by Massive Pairwise Alignmentsmumu
C++ implementation of lulu, a R package for post-clustering curation of metabarcoding datapairdist
Creates a neighbor-joining tree from a set of sequences, using maximum likelihood distances based on pairwise sequence alignmentswarm-tests
Datasets and scripts to test the amplicon clustering method swarmvsearch-tests
unit tests for vsearchten_simple_rules_for_code_refactoring
fred-metabarcoding-pipeline
Fred's metabarcoding pipeline: from raw fastq files to an occurrence table at light-speedBIO9905MERG1_lulu_seminar
post-clustering curation of metabarcoding data with lulumetabarcoding-pipeline
A complete description of my current metabarcoding pipelinebioinformatics-scripts
A collection of useful bioinformatics scriptsLove Open Source and this site? Check out how you can help us