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latent-predictive-learning
Code to accompany our paper "The combination of Hebbian and predictive plasticity learns invariant object representations in deep sensory networksโ bioRxiv 2022stork
A differentiable spiking neural network simulatorneural-tangent-transfer
Code accompanying our paper "Finding trainable sparse networks through Neural Tangent Transfer" to be published at ICML-2020.LSTree
LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.glib-nature2018-materials
Image Processing Package for the Paper "Self-organization and symmetry breaking in intestinal organoid development"RDCNet
Recurrent Dilated Convolutional Networkgliberal-scMultipleX
Feature extraction and linking of multiplexing data.GUIFold
GUI for running jobs with a local installation of AlphaFold2. Supports submission to queuing systems.brainscales-2-surrogate-gradients
faim-cnn-course
faim-cryoflare
CryoFLARE: FMI Live Analysis and Reconstruction Engine for single particle Cryo EM dataneural-decoding-RSNN
Recurrent spiking neural networks (RSNNs) for decoding of motor signals from cortical spike trainsimplicit-var-reg
gfriedri-em-alignment
Alignment tools used in the Friedrich lab.glib-lukonin-et-al-2020
Image Segmentation Package for the Paper "Phenotypic landscape of intestinal organoid regeneration"faim-robocopy
A python-based UI for robocopygbuehler-MiniChip
small collection of R functions for ChIPseq analysisdisinhibitory-control
buehler-colonyclassification
Pipeline for automated yeast colony classification using neural networksgfriedri-em-alignment-flows
faim-imagej-imaris-tools
Commands to interact with Imaris File ConverterneuRoi
splitrsync
A tool to parallelize rsync based transfersRosEM
Pipeline and GUI for cryoEM model refinement using Rosetta and Phenixgchao-koopa
Keenly optimized obliging picture analysisggrosshans_analysis_dpf-3
Analysis for dpf-3 with ce11Love Open Source and this site? Check out how you can help us