• Stars
    star
    2
  • Language Forth
  • License
    GNU General Publi...
  • Created almost 14 years ago
  • Updated about 13 years ago

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

modified primer3 version that tracks primer3.sourceforge.net trunk

More Repositories

1

phyluce

software for UCE (and general) phylogenomics
Python
79
star
2

illumiprocessor

pre-process illumina reads
Python
18
star
3

edittag

edit distance sequence tags and helpers
Python
12
star
4

protocols

Our laboratory repository
Python
11
star
5

seqtools

Tools for sequence and alignment manipulation
Python
9
star
6

splitaake

demultiplex massively parallel sequencing data
Python
8
star
7

bird-db

the application and database underlying birds.faircloth-lab.org
Python
6
star
8

tapir

Tally Approximations of Phylogenetic Informativeness Rapidly (TAPIR)
Python
6
star
9

conda-recipes

bioinformatics program recipes for the conda package manager
Python
4
star
10

demuxipy

Locate, error-correct, trim, and organize (hierarchically) sequence-tagged next-generation DNA reads
Python
4
star
11

uce-probe-sets

Repository of different outgroup databases for use building UCE trees
4
star
12

itero

A strongly opinionated, iterative, guided contig assembly pipeline. Integrates (+error-correction), bwa-mem, bedtools, and samtools. MPI and multiprocessing aware.
Python
3
star
13

uce-probe-design

Code for designing UCE probes
Python
2
star
14

colony2-helpers

code to help run colony2
1
star
15

mp-est

modified version of mpest with CLI parameters
C
1
star
16

data-theme

Ruby
1
star
17

msatcommander-gs

A grown-up version of msatcommander for genome-scale data
Python
1
star
18

pd-ht

1
star
19

dimensions

Code associated with our NSF Dimensions of Biodiversity grant
1
star
20

radcap

Software for processing data from RADcap
Python
1
star
21

cookiecutter-supermike-examl

Shell
1
star
22

2011-fairclothetal-systbiol-uce

[Unsupported] Code used in Faircloth et al. Ultraconserved Elements Anchor Genetics Markers
Python
1
star