evansenter/ucsb

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Created over 12 years ago
Updated over 12 years ago

evansenter/ucsb

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A collection of (old, beware!) code written while in the Bioinformatics undergrad program at UCSB

f_heap

http://en.wikipedia.org/wiki/Fibonacci_heap

diverge

A simple collection of functions for determining the divergence between two distributions.

gene

A genetic algorithm to generate art.

waves

Last.fm scraper in Rails.

rnaborcpp

wikitracker

A tree based representation of Wikipedia browsing.

vienna_rna

Moved to https://github.com/evansenter/wrnap

hungarian

http://en.wikipedia.org/wiki/Hungarian_algorithm

hubris

symboltoproc

erv

ERV / BLAST scripts

corporate_nightmare

Corporate Nightmare

dijkstra

http://en.wikipedia.org/wiki/Dijkstra's_algorithm

central_rna

pdb_quaternion_rotations

Quaternion rotations of PDB files in Clojure

rna_scripts

A collection of tools surrounding the RNAbor paper, in Ruby and C

comprende

List Comprehension In Ruby.

dinosaur

Playing around with writing a Lisp-like prototype-inheritance language

lagrange

Lagrange Interpolation class in Ruby

rbfam

Light wrapper for RFam data in Ruby.

autobot

rnax

Full JS stack to manage RNA webservers

y

http://en.wikipedia.org/wiki/Fixed_point_combinator

fftbor

FFTbor codebase is a collection of algorithms that uses the FFT to consider thermodynamic parameters for RNA parameterized by basepair distance (symmetric difference) from an input structure[s].