evanfloden/lncRNA-Annotation-nf

Stars
10
Rank 1,807,489 (Top 36 %)
Language Nextflow
Created over 8 years ago
Updated over 6 years ago

evanfloden/lncRNA-Annotation-nf

evanfloden

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

A Nextflow lncRNA Annotation Pipeline based on STAR, Cufflinks and FEELnc

tuxedo-nf

A Nextflow implementation of the Tuxedo Suite of Tools: HISAT, StringTie & Ballgown

concTree

Using Alignment Uncertainty from Many Multiple Sequence Alignments to Create Consensus Trees

nf-module-demo

Demo for Nextflow modules and components proposal

vast-tools-nf

A Nextflow Implementation of VAST-TOOLS for profiling alternative splicing events in RNA-Seq data

dpa-analysis

Nextflow Pipeline for the analysis of Double Progressive Alignment (DPA)

Jupyter Notebook

paraMSA

Using uncertainty in multiple sequence alignments for phylogenetic trees and bootstrap support values

nf-toxomix

OpenRiskNet pipeline for TGX case study: toxicology predictions based on transcriptomic profiles

stable-diffusion-nf

Proof-of-concept pipeline for stable diffusion in Nextflow and Tower

phyvaluate-nf

Evaluation of Phylogenetic Trees from Simulated Data

sra-dump-nf

Some ideas for pulling experiments directly from the SRA with Nextflow