etetoolkit/treematcher

Stars
9
Rank 1,939,727 (Top 39 %)
Language
Python
Created over 8 years ago
Updated about 7 years ago

etetoolkit/treematcher

etetoolkit

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Search flexible patterns within tree structures using regular expression like syntax.

ete

Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.

cookbook

course

Jupyter Notebook

pmodeltest

Python implementation of modeltest/prottest supporting proteins and nucleotides (can be run in parallel).

webplugin

Experiments for a new webplugin module (examples for phylotastic.org project )

ext_apps

A compilation of external software used by ETE