eggzilla/SelectSequencesFromMSA

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5
Rank 2,861,937 (Top 57 %)
Language
Haskell
License
GNU General Publi...
Created over 7 years ago
Updated almost 6 years ago

eggzilla/SelectSequencesFromMSA

eggzilla

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Tool to select representative sequences from a multiple sequence alignment

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Genbank format tools and parser

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Visualize HMMs, CMs and their comparisons

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Haskell cabal libary for submission and result retrieval from the NCBI Blast REST webservice

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Haskell cabal libary for submission and result retrieval from the NCBI Entrez REST webservice

ClustalParser

Parse output of Clustal tools

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Haskell cabal libary for parsing Meme motif finder xml output

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Libary containing parsing and visualisation functions and datastructures for Stockholm aligmnent format.

TaxonomyTools

Tools to process and visualize NCBI taxonomy data

BioHMM

Libary containing parsing and visualisation functions and datastructures for Hidden Markov Models in HMMER3 format.

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Ensembl related functions and datastructures

Taxonomy

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smiles

Haskell cabal libary for parsing smiles strings used to represent molecules

supplementer

BiobaseHTTPTools

Tools for querying bioinformatics web resources

Phylogeny

Parse, process and compute phylogeny data

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Haskell cabal libary for parsing RNAz output

RNAplexParser

Parse output of RNAplex

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A video game inspired by science.

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GCC_2017_The_RNA_Workbench

RNA workbench presentation, Galaxy Community Conference 2017, Montpellier France

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