dzyla/Fetch-full-sequences-from-Blast-NCBI

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Created almost 7 years ago
Updated almost 7 years ago

dzyla/Fetch-full-sequences-from-Blast-NCBI

dzyla

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Download full sequences from blast protein aligement

Follow_Relion_gracefully

New script to follow Relion projects in a browser!

MRC_napari_viewer

Cryo-EM data viewer in napari

EPU_beamtiltclasses

Very simple script for EPU users which adds beam tilt classes to the star file

biorxiv_search

Fast semantic search for biorXiv manuscripts

Relion_follow_classification

Follow your classification and refinement in Relion the real time!

cryoEM_plotly

Plot the cryoEM maps using plotly and open them in the browser!

relion_to_cistem

Converts autopick cooridinates from Relion to cisTEM

cryoem_notebook

Cryo-EM notebook example for processing in Relion and cryoSPARC

Jupyter Notebook

umod_processing_scripts

A library of scripts which were used to analyze and visualize the data

relion_to_cryosparc2

Export coordinates from Relion to Cryosparc2

Relion_star_parser

A simple .star file parser which allows Relion star file plotting, modification and conversion

abs_correction

A small python script to correct absorbance for scattering

proteom_histogram

Simple script to show histograms based on proteom. Works well with uniprot fasta files

select_micrographs_from_jpegs

MRCVolume_viewer

Preview mrc volume in a simple viewer!

system_utils

Some general system tools (info and GPU stress)

script_repo

Repository to keep some my scripts on Github

Hugo_shortcode_gallery

simple yet stylish Hugo shorcode gallery

MRC_map_to_cube

Convert tomography map from cuboid to cube which can be open in Relion