dpryan79/lib2bit dpryan79/lib2bit

  • Stars
    star
    4
  • Rank 3,304,323 (Top 66 %)
  • Language
    C
  • License
    MIT License
  • Created over 8 years ago
  • Updated over 2 years ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
dpryan79/lib2bit
github

dpryan79

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

A C library for accessing 2bit files

More Repositories

1

ChromosomeMappings

This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.
219
star
2

MethylDackel

A (mostly) universal methylation extractor for BS-seq experiments.
C
139
star
3

libBigWig

A C library for handling bigWig files
C
68
star
4

SE-MEI

Tools for finding mobile element insertions from single-end datasets
C
19
star
5

MethIndelRealigner

A local realigner around InDels for MethylSeq data
C
12
star
6

Misc

Misc. utilities
C
11
star
7

bison

Bisulfite alignment on nodes of a cluster
C
9
star
8

Answers

Random code produced to answer questions on biostars/seqanswers/etc.
Python
7
star
9

libGTF

A library for processing and searching GTF and BED files
C
6
star
10

BBMeth

BBMeth: An R package for fitting methylation data with a beta-binomial model
R
3
star
11

RNAcentralTools

A set of tools useful for using RNAcentral in smallRNAseq analyses.
C
2
star
12

HTCondor-galaxy

A docker container for layering HTCondor on top of a Galaxy docker image
Python
2
star