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genotyping_23andme
mePGSC
Code for the Potato Genome Sequencing Consortium, but hopefully generic enough.Debian-MediaWiki-Extensions
Setting up a repo to store files related to packaging MediaWiki-Extensions for Debiansandbox
Learning how to be a git.MediaWiki-Extension-VariablesExtension
A very simple MediaWiki extension that allows you to define a variable on a page, use it later in that same page, change its value, possibly to a value given by an expression in terms of the old value, etc.The-Clear-Fields-Chromium-extension
Clear Fields is a simple Chromium extension to automatically 'clear' form fields in your browseratac2syntab
A simple conversion utility for the Assembly To Assembly Comparison toolGbrowseImage
A Mediawiki extension for displaying Gbrowse images.GCal-Upcoming
The aim is to email myself a list of all events in my calendar(s), along with 'days until...', to help me plan for upcoming events better.GFF-projection-script
A script to map GFF features via AGP or a 'mapping' GFFBioWiki
Code for updating the activity of various 'BioWikis' on the http://bifx.org/wikiPGSC-Sequence-Alignment-Mapping
Code to handle aligning sequences to the potato genome, including 454 paired-end sequences and various 'mate pair' sequences from BACs, fosmids, and tomato clones.Bio-Das-ProServer
Just whacking ProServer into git for my own development needsMediaWiki--
Perl code for working with templates (mostly)TwitterBot---nowlistening-Perl-script-for-xmms
I wanted to tweet my important selection in music. Sometimes people ask why I wanted to do this...docker-firefox
Dockerized FirefoxMetaBase
Code for synchronizing MetaBase with the Nucleic Acids Research Database Issue (online Molecular Biology Database Collection)hlaimp-report
Report generator for HLA*IMP:2 results. See https://oxfordhla.well.ox.ac.uk/hla/SwissProt-and-Tremble-RDB
Creates and populates a relational database with data from SwissProt style .dat files.PDB-rsync
Scripts for synchronizing the PDBBioMOP
A project to build a 'BioPerl' code metadata database using MOPEnsEMBL--core-
For each organism supported by Ensembl, a species-specific Ensembl Core database stores the bulk of annotation information.apachesolr_examples
Clone of repository here: https://drupal.org/project/apachesolr_examplesExtensions-Wiki
Code to help populate the Semantic MediaWiki 'Extensions' database from MW.OrgLove Open Source and this site? Check out how you can help us