davidaknowles/dox davidaknowles/dox

  • Stars
    star
    5
  • Rank 2,861,937 (Top 57 %)
  • Language
    R
  • License
    Apache License 2.0
  • Created over 8 years ago
  • Updated over 6 years ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
davidaknowles/dox
github

davidaknowles

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Determining the genetic basis of anthracycline-cardiotoxicity by molecular response QTL mapping in induced cardiomyocytes

More Repositories

1

leafcutter

Annotation-free quantification of RNA splicing. Yang I. Li, David A. Knowles, Jack Humphrey, Alvaro N. Barbeira, Scott P. Dickinson, Hae Kyung Im, Jonathan K. Pritchard
R
203
star
2

eagle

An R package for detecting Gene-by-Environment (GxE) interaction effects on the transcriptome using Allele Specific Expression quantified from RNA-seq
R
20
star
3

gprn

Gaussian Process Regression Network code
13
star
4

tf_net

A custom conv net for the DREAM ENCODE challenge
Python
8
star
5

pydt

Pitman Yor diffusion tree sampler
C++
5
star
6

tensor_gp

Code for Tensor Gaussian Process Regression for predicting drug combination synergy, developed for the AstraZeneca-Sanger Drug Combination Prediction DREAM Challenge 2015: https://www.synapse.org/#!Synapse:syn4231880/wiki/235645
Stan
5
star
7

suez

R package for mapping response-expression QTLs
R
4
star
8

gamma_sgvb

MATLAB
3
star
9

dpvc

Dirichlet Process Variable Clustering
MATLAB
2
star
10

splice_wave

Jupyter Notebook
1
star
11

nsfa

Nonparametric Bayesian Sparse Factor Analysis
MATLAB
1
star
12

eagle1S

Re-implementation of EAGLE using Stan.
R
1
star
13

lacrosse

lacrosse: LAtent ChaRacteristics Of Small-molecule SEnsitivity. David A Knowles, Gina Bouchard, Sylvia Plevritis.
R
1
star
14

epidiff

Python
1
star
15

pisquared

R package to estimate sharing between two arrays of p-values
C++
1
star