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Data Analysis and Visualization in Python for Ecologists

166

python-ecology-lesson

Introduction to Geospatial Raster and Vector Data with R

160

r-raster-vector-geospatial

112

r-socialsci

R for Social Scientists

110

datacarpentry.github.io

Data Carpentry website

SCSS

image-processing

Image Processing with Python

Forkable teaching materials for course on working with data in R

semester-biology

Data Wrangling and Processing for Genomics

wrangling-genomics

Shell

shell-genomics

Introduction to the Command Line for Genomics

r-intro-geospatial

Introduction to R for Geospatial Data

sql-ecology-lesson

Data Management with SQL for Ecologists

genomics-workshop

Genomics Workshop Overview

R-genomics

Lesson on data analysis and visualization in R for genomics

The Organization lesson for the Reproducible Science Curriculum

rr-organization1

Data Organization in Spreadsheets for Ecologists

spreadsheet-ecology-lesson

organization-geospatial

Introduction to Geospatial Concepts

geospatial-workshop

Geospatial Workshop Overview

python-socialsci

Data Analysis and Visualization with Python for Social Scientists

astronomy-python

Intro to R and RStudio for Genomics

genomics-r-intro

stata-economics

Economics Lesson with Stata

Makefile

OpenRefine-ecology-lesson

Data Cleaning with OpenRefine for Ecologists

openrefine-socialsci

OpenRefine for Social Science Data

organization-genomics

Project Organization and Management for Genomics

spreadsheets-socialsci

Data Organization in Spreadsheets for Social Scientists

python-neuroimaging-lesson

Lessons on neuroimaging analysis with Python

Ecology Workshop Overview

ecology-workshop

cloud-genomics

Introduction to Cloud Computing for Genomics

organization-geospatial-DEPRECATED

Social Science Workshop Overview

socialsci-workshop

Resources for automation tutorials

rr-automation

Data Management with SQL for Social Scientists

sql-socialsci

rnaseq-data-analysis-ARCHIVED

Análisis y visualización de datos usando Python

python-ecology-lesson-es

Introduction materials for Reproducible Research Curriculum

rr-intro

Data Carpentry lessons on text mining for the social sciences

textmining-socialsci-ARCHIVED

DEPRECATED-cloud-genomics-orig

Deprecated - this repository is an outdated fork from datacarpentry/cloud-genomics

Repository for lesson materials on Literate Programming

rr-literate-programming

Reproducible Science Curriculum Lesson for Version Control

rr-version-control

Meeting notes and other documents related to curriculum advisory committees for Data Carpentry lessons.

curriculum-advisors

lesson-template-ARCHIVED

This is a repository that is a template for lessons

Advanced remote sensing lessons developed in October 2015 at the NEON / Data Carpentry Spatio-temporal data lesson hackathon. These lessons are under development.

NEON-R-Remote-Sensing

CSS

R-dplyr-ecology-archived

Lesson on manipulating data frames using dplyr and the ecology dataset

NEON-R-Spatial-Vector-deprecated

Lessons that teach how to 1) open shapefiles in R, 2) use shapefiles to extract values from rasters in R NOTE: the published version of these lessons can be found here: http://neondataskills.org/tutorial-series/vector-data-series/

CSS

R-tidy-data-LoR-ARCHIVED

Information on an 'HPC' Carpentry that includes information about lesson in high throughput and high performance computing

hpc-carpentry

NEON-R-Tabular-Time-Series

These data tutorials complement the spatio-temporal lessons (raster and vector) in R lessons. These lessons are close to being published on the neondataskills.org website.

Workshop and lesson templates

rr-workshop

DEPRECATED: This repository is now frozen - For the most recent version of these materials, see: https://github.com/data-lessons/introduction-genomics/blob/gh-pages/01-intro-to-dataset.md

DEPRECATED-knowyourdata-genomics

Introduction to the Command Line for Economics

shell-economics

Materials for the topic 'organization' in the Reproducible Research Curriculum

presentations

organization-reproduceR-lesson

Reproducible Science Curriculum Lesson for Publication

rr-publication

This repository contains Data Carpentry lessons on using the shell data wrangling in ecology

shell-ecology-ARCHIVED

reproduceR-workshop

Overview of the Reproducible Research in R workshop

2014-09-29-iDigBio

Data Carpentry repository for iDigBio workshop Sept 29-30

Data Carpentry workshop at Sloan-Kettering

2015-08-24-Sloan-Kettering

Genomics Data Carpentry workshop at ISU

2015-08-24-ISU

UC Davis Data Carpentry workshop

2015-02-09-ucdavis

genomics-hackathon

Materials and logistical information for the Genomics and Assessment Hackathon March 23-25

DEPRECATED-introduction-genomics

This lesson is deprecated. See https://github.com/datacarpentry/organization-genomics

Data Carpentry workshop at the Federal Reserve Board

2015-06-30-FederalReserveBoard

DEPRECATED: please use https://github.com/swcarpentry/workshop-template instead

workshop-template-ARCHIVED

DEPRECATED: This repository is now frozen - please see individual lesson repositories.

DEPRECATED-R-ggplot2-ecology

2016-05-26-NIH

Data Carpentry tutorial at PyCon: An Introduction to Python for Data Analysis and Visualization

2016-05-29-PyCon

Information for lesson releases

genomics-infrastructure

lesson-release

2015-05-29-great-plains

The Data Carpentry lessons on scripting for ecologists

scripting-ecology

2015-05-30-HASTAC

Data Carpentry workshop at HASTAC