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datacarpentry

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Repository Details

Data Carpentry workshop materials

Data Carpentry Core Curriculum

This repository is the historical repository of Data Carpentry lessons. Each lesson is now its own repository, so please see those individual repositories for the most recent versions of the lessons or to do any lesson development.

DO NOT USE OR DEVELOP IN THIS REPOSITORY

Individual lessons

The repositories for individual lessons can be found here:

More Repositories

1

R-ecology-lesson

Data Analysis and Visualization in R for Ecologists
R
308
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2

python-ecology-lesson

Data Analysis and Visualization in Python for Ecologists
Jupyter Notebook
160
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3

r-raster-vector-geospatial

Introduction to Geospatial Raster and Vector Data with R
R
112
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4

r-socialsci

R for Social Scientists
R
110
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5

datacarpentry.github.io

Data Carpentry website
SCSS
96
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6

image-processing

Image Processing with Python
HTML
95
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7

semester-biology

Forkable teaching materials for course on working with data in R
HTML
75
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8

wrangling-genomics

Data Wrangling and Processing for Genomics
Shell
68
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9

shell-genomics

Introduction to the Command Line for Genomics
61
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10

r-intro-geospatial

Introduction to R for Geospatial Data
R
47
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11

sql-ecology-lesson

Data Management with SQL for Ecologists
47
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12

genomics-workshop

Genomics Workshop Overview
43
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13

R-genomics

Lesson on data analysis and visualization in R for genomics
HTML
40
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14

rr-organization1

The Organization lesson for the Reproducible Science Curriculum
HTML
37
star
15

spreadsheet-ecology-lesson

Data Organization in Spreadsheets for Ecologists
37
star
16

organization-geospatial

Introduction to Geospatial Concepts
R
36
star
17

geospatial-workshop

Geospatial Workshop Overview
35
star
18

python-socialsci

Data Analysis and Visualization with Python for Social Scientists
32
star
19

astronomy-python

Jupyter Notebook
30
star
20

genomics-r-intro

Intro to R and RStudio for Genomics
R
27
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21

stata-economics

Economics Lesson with Stata
Makefile
27
star
22

OpenRefine-ecology-lesson

Data Cleaning with OpenRefine for Ecologists
24
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23

openrefine-socialsci

OpenRefine for Social Science Data
23
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24

organization-genomics

Project Organization and Management for Genomics
21
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25

spreadsheets-socialsci

Data Organization in Spreadsheets for Social Scientists
21
star
26

python-neuroimaging-lesson

Lessons on neuroimaging analysis with Python
Jupyter Notebook
20
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27

ecology-workshop

Ecology Workshop Overview
20
star
28

cloud-genomics

Introduction to Cloud Computing for Genomics
19
star
29

organization-geospatial-DEPRECATED

HTML
17
star
30

socialsci-workshop

Social Science Workshop Overview
Python
17
star
31

rr-automation

Resources for automation tutorials
HTML
13
star
32

sql-socialsci

Data Management with SQL for Social Scientists
11
star
33

rnaseq-data-analysis-ARCHIVED

HTML
10
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34

python-ecology-lesson-es

Análisis y visualización de datos usando Python
Jupyter Notebook
10
star
35

rr-intro

Introduction materials for Reproducible Research Curriculum
HTML
10
star
36

textmining-socialsci-ARCHIVED

Data Carpentry lessons on text mining for the social sciences
9
star
37

DEPRECATED-cloud-genomics-orig

Deprecated - this repository is an outdated fork from datacarpentry/cloud-genomics
Python
9
star
38

rr-literate-programming

Repository for lesson materials on Literate Programming
HTML
8
star
39

rr-version-control

Reproducible Science Curriculum Lesson for Version Control
HTML
8
star
40

curriculum-advisors

Meeting notes and other documents related to curriculum advisory committees for Data Carpentry lessons.
8
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41

lesson-template-ARCHIVED

This is a repository that is a template for lessons
HTML
7
star
42

NEON-R-Remote-Sensing

Advanced remote sensing lessons developed in October 2015 at the NEON / Data Carpentry Spatio-temporal data lesson hackathon. These lessons are under development.
CSS
7
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43

R-dplyr-ecology-archived

Lesson on manipulating data frames using dplyr and the ecology dataset
R
6
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44

NEON-R-Spatial-Vector-deprecated

Lessons that teach how to 1) open shapefiles in R, 2) use shapefiles to extract values from rasters in R NOTE: the published version of these lessons can be found here: http://neondataskills.org/tutorial-series/vector-data-series/
CSS
6
star
45

R-tidy-data-LoR-ARCHIVED

HTML
5
star
46

hpc-carpentry

Information on an 'HPC' Carpentry that includes information about lesson in high throughput and high performance computing
5
star
47

NEON-R-Tabular-Time-Series

These data tutorials complement the spatio-temporal lessons (raster and vector) in R lessons. These lessons are close to being published on the neondataskills.org website.
HTML
5
star
48

rr-workshop

Workshop and lesson templates
Python
4
star
49

DEPRECATED-knowyourdata-genomics

DEPRECATED: This repository is now frozen - For the most recent version of these materials, see: https://github.com/data-lessons/introduction-genomics/blob/gh-pages/01-intro-to-dataset.md
HTML
4
star
50

shell-economics

Introduction to the Command Line for Economics
Python
3
star
51

presentations

3
star
52

organization-reproduceR-lesson

Materials for the topic 'organization' in the Reproducible Research Curriculum
HTML
3
star
53

rr-publication

Reproducible Science Curriculum Lesson for Publication
HTML
3
star
54

shell-ecology-ARCHIVED

This repository contains Data Carpentry lessons on using the shell data wrangling in ecology
3
star
55

reproduceR-workshop

Overview of the Reproducible Research in R workshop
3
star
56

2014-09-29-iDigBio

Data Carpentry repository for iDigBio workshop Sept 29-30
HTML
3
star
57

2015-08-24-Sloan-Kettering

Data Carpentry workshop at Sloan-Kettering
HTML
2
star
58

2015-08-24-ISU

Genomics Data Carpentry workshop at ISU
HTML
2
star
59

2015-02-09-ucdavis

UC Davis Data Carpentry workshop
R
2
star
60

genomics-hackathon

Materials and logistical information for the Genomics and Assessment Hackathon March 23-25
2
star
61

DEPRECATED-introduction-genomics

This lesson is deprecated. See https://github.com/datacarpentry/organization-genomics
HTML
2
star
62

2015-06-30-FederalReserveBoard

Data Carpentry workshop at the Federal Reserve Board
HTML
2
star
63

workshop-template-ARCHIVED

DEPRECATED: please use https://github.com/swcarpentry/workshop-template instead
Python
2
star
64

DEPRECATED-R-ggplot2-ecology

DEPRECATED: This repository is now frozen - please see individual lesson repositories.
R
2
star
65

2016-05-26-NIH

HTML
1
star
66

2016-05-29-PyCon

Data Carpentry tutorial at PyCon: An Introduction to Python for Data Analysis and Visualization
Python
1
star
67

logos

Logos for the Data Carpentry project
1
star
68

genomics-infrastructure

1
star
69

lesson-release

Information for lesson releases
1
star
70

2015-05-29-great-plains

HTML
1
star
71

scripting-ecology

The Data Carpentry lessons on scripting for ecologists
R
1
star
72

2015-05-30-HASTAC

Data Carpentry workshop at HASTAC
HTML
1
star
73

2014-07-24-beacon

Data Carpentry workshop July 24-25 BEACON
1
star
74

dc_zurich

Repo for DC workshop at the University of Zurich
1
star
75

governance

Repository for minutes and notes regarding the Data Carpentry Governance Committee
1
star
76

2015-04-23-stanford

Stanford Data Carpentry Workshop
1
star
77

documents

Data Carpentry documents
TeX
1
star
78

2015-05-03-NDIC

Data Carpentry workshop at 2015 National Data Integrity Conference at CSU
1
star