Discover cyverse-archive/de-files Open Source project

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Created almost 13 years ago
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File-related services for the Discovery Environment backend.

DiscoveryEnvironmentBackend

All of the backend code for the Discovery Environment in a single repository.

Clojure

kameleon

Database library that uses Korma to provide access and utilities to the DE's backend databases.

Clojure

The CyVerse Discovery Environment

Java

Clavin

Command-line utility to load .properties files into Zookeeper.

Clojure

Nibblonian

Service that provides an HTTP JSON API for common iRODS operations.

Clojure

dewey

A message based iRODS indexer for elasticsearch.

Clojure

DiscoveryEnvironment

Web portal for the iPlant Life Sciences Cyberinfrastructure

Java

interapps-landing

Web app server with support for CAS authentication and the associated landing page done in React

JavaScript

broadcasters

iPlant Viewer-Editor integration framework

Java

iplant-monitor

Service used to monitor condor jobs on a condor cluster.

JavaScript

iplant-clojure-commons

Clojure code that is useful across multiple iPlant services.

Clojure

OSM

Thin HTTP layer on top of MongoDB that allows a subset of MongoDB's operation. Also provides HTTP callbacks.

Clojure

JEX

This service accepts analysis submissions in the form of JSON submitted by the Discovery Environment and turns it into Condor DAG and job submission files.

Clojure

filetool

Command-line utility used in the Discovery Environment that transfers files into an iRODS installation.

Clojure

iplant-email

Backend service that allows other backend services to send emails to users.

Clojure

zoidberg

This project is the backend for the tool integration tool (Tito). It allows the front-end to interact with both the Object State Management (OSM) and the Discovery Environment through a single service.

CoffeeScript

ui-disk-resource-module

GWT module for UI components associated with the "Data" window abstraction.

Java

ui-metadata-module

GWT module for UI components associated with metadata-driven widgets.

Java

clj-cas

A CAS Client library written in Clojure.

Clojure

hibernatetoolkit

A common toolkit for using Hibernate ORM.

Java

de-persistence

Persistence library for interacting with relation data used by the Discovery Environment

Java

de-base-services-pom

A Maven POM project for base services used by the Discovery Environment backend.

kifshare

App that handles downloading files from iRODS when given a ticket.

Clojure

ui-apps-widgets-module

Discovery Environment specific shared user interface widgets.

Java

facepalm

Database migration and management tool.

Clojure

Conrad

Clojure

lein-iplant-cmdtar

Leiningen plugin for generating tarball distributions for command-line utilities written in Clojure

Clojure

de-database-schema

Underlying Discovery Environment database schema.

Clojure

de-webapp

The Discovery Environment web application that provides the user interface for the overall Discovery Environment distributed system.

Java

metadactyl

An evolving metadata format processing library.

Java

NotificationAgent

Accepts callback notifications from the OSM about job status changes and provides an endpoint for the Discovery Environment that is used to look up the states of a user's analyses.

Clojure

lein-iplant-rpm

Leiningen plugin to generate RPM files for iPlant Clojure projects.

Clojure

Donkey

Backend for the Discovery Environment.

Clojure

anon-files

Clojure

iplant-clavin

Clavin Client for Perl Modules

Perl

de-business

Business layer for Discovery Environment services backend.

Java

ui-pipelines-module

GWT module for UI components associated with the "Automated Workflow" abstraction.

Java

ui-commons-module

GWT module of common UI components utilized across of iPlant GWT applications

Java

ui-pipeline-builder-module

A GWT Module for graphically creating a simple pipeline within the Discovery Environment

Java

dingle

Clojure

ansible

JavaScript

clj-jargon

Clojure API on top of iRODS's jargon-core

Clojure

Stubby

Stubbed out version of an internal API. Used for development purposes.

Clojure

iplant-buggalo

The interface between the tree viewer service and the discovery environment.

Perl

ui-applications-module

GWT module for UI components associated with the "Apps" abstraction.

Java

Scruffian

Download/Upload REST-like API for iRODS

Clojure

Panopticon

Basic job monitor for Condor

Clojure

de-common-module

Discovery Environment common Java-based web application infrastructure

Java

de-authn

Authentication module for the Discovery Environment

Java

de-gxt-ui

The Discovery Environment frontend UI

Java

Tito

Discovery Envrionment Tool Integration web application.

Java

jsonutil-module

GWT module of utilities for handling JSON data.

Java

metadactyl-clj

A mule-replacement interface to the Metadactyl services, written in clojure.

Clojure

cyverse-archive/de-files

cyverse-archive

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