csglab/RCADE2

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Created over 7 years ago
Updated over 5 years ago

csglab/RCADE2

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Recognition Code-Assisted Discovery of regulatory Elements v2

GEDI

Gene Expression Decomposition and Integration

REMBRANDTS

REMoving Bias from Rna-seq ANalysis of Differential Transcript Stability

DiffRAC

A flexible R function for comparing response proportions in sequencing count data

CRIES

Counting Reads for Intronic and Exonic Segments

MPAQT

PhantomPurgeR

R package for the optimal purging of phantom molecules by the robust estimation of the sample index hopping rate in multiplexed droplet-based single-cell RNA-seq data

phantom_purge

Please go to https://github.com/csglab/PhantomPurgeR

JAMS

Quantitative modeling of sequence, DNA accessibility, and methylation preferences of transcription factors using ChIP-seq data.

transcriptional_reprogramming_muscle_cells

Dynamics of niche mediated transcriptional reprogramming of muscle stem cells