covidclinical/visualization-notebooks

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covidclinical/visualization-notebooks

covidclinical

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Jupyter Notebooks and other code for 4CE data visualizations.

Phase2.1DockerAnalysis

PhaseX.2SqlDataExtraction

SQL and documentation to extract 4CE Phase 1.2 and 2.2 data files.

Phase2.1DataRPackage

Phase1.1NeuroRCode

Association of COVID-19 and Neurological Phenotypes

Phase1.1SqlDataExtraction

website

Repository for covidclinical.net website.

Phase2.1SqlDataExtraction

SQL code to generate Phase 2.1 CSV files

Phase2.1UtilitiesRPackage

R utility functions for Phase 2.1 of the 4CE Consortium

Phase2.1AKIRPackage

R Package to run statistical analyses for COVID-19 patients with acute kidney injury.

Phase2.2.bacterial_infections

Analysis of the bacterial infections trends in the children population

Phase2.1MissingnessRPackage

Phase2.2MISCRPackage

Phase2.2.psy_peds_trends

Phase1.2PASCAnalysisRScript

Phase2.1ardsRPackage

Phase2.1MissingRPackage

Phase2.1NeuroRPackage

R Package to run statistical analyses for COVID-19 patients with neurological conditions.

Phase2.1NeuroRSummaries

Analysis of "Neurological diagnoses in hospitalized COVID-19 patients associated with adverse outcomes: a multinational cohort study"

Phase2.1RDeveloperGuide

Phase2.1SeverityAugRPackage

PhaseX.2QualityControlRpackage

Generate QC reports for 4CE phase 1.2 and phase 2.2 data

Phase2.1NeuroAnalysis

Analysis of "Neurological diagnoses in hospitalized COVID-19 patients associated with adverse outcomes: a multinational cohort study"