compbiocore/VariantVisualization.jl

Stars
85
Rank 385,668 (Top 8 %)
Language
Julia
License
Other
Created over 6 years ago
Updated over 1 year ago

compbiocore/VariantVisualization.jl

compbiocore

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Julia package powering VIVA, our tool for visualization of genomic variation data. Manual:

bioconductor-workshop-1

cbc-documentation-templates

Repository for documentation templates.

refchef

YAML-based genomics reference management.

bioflows

Bioflows is an easy to use package for running bioinformatics workflows.

metagenomics-power-analyses-tutorial

Tutorial for doing power analyses for metagenomics.

RSeqAn

SeqAn headers for R

nmrdock

NMR docker image dockerfile

bioconductor-workshop-2

BioCookbook.jl

A collection of Julia scripts for bioinformatics in use by CBC

rnaseq_workshop_2021

RNAseq workshop 2021

Jupyter Notebook

deseq-workshop-1

qcviz-nuxt

QC Visualization App - Built with Nuxt.js

qckitfastq

Quality Control toolkit for FASTQ files

single-cell-workshop

Materials for Brown CBC's single-cell analysis workshop

deseq-workshop-2

genome-stats-tools

Uses biopython to pull sequences from ncbi

r-workshop-1

Intro to R workshop

Jupyter Notebook

qckit

Website for qckit, R packages for quality control of genomic sequencing data

compbiocore.github.io

DEseq_workshop_2_2021

Jupyter Notebook

poweranalyses

A collection of power analyses done for different sequencing experiments

jupyterfleet

Cohesive utility to deploy and configure a group of AWS instances running Jupyter for teaching