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sample-sheet
A permissively licensed library designed to replace Illumina's Experiment Managercvbio
Artisanal 🤣 bioinformatics tools and pipelines in Scalagenome-browser
A lightweight Python graphing API for genomic featuresseattle-food-truck
Python app for the glorious food trucks in Seattle ðŸŒnucleic
Analysis and plotting library for base substitution spectra and signaturessnakescale
Non-strict wrappers for the data pipelining language Snakemakegimme
Provisioning stack for EC2 instances powered by Vagrant and Ansible (unmaintained, difficult to use on new MacOS)vartovcf
Convert variants from VarDict/VarDictJava into VCF v4.2 format.comp-bio-conferences
Intl. Computational Biology & Bioinformatics conferences on the CLIneodisambiguate
Disambiguate reads that were mapped to multiple references.dotfiles
My dashboardkrakenplot
🦑 Visualize phylogenetic trees from the taxonomic sequence classifier Krakenmpl-helpers
Matplotlib wrappers for those hard-to-remember figure tweaks.aur-packages
Packages I maintain on the Arch User Repository (AUR)clintval.github.io
biodrawing
Small sketches of common ideas with a biology or bioinformatics theme.iterato
Safe and completely lazy parallel iteration in Scalapendant
Python 3.6+ library for submitting to AWS Batch interactivelyinterval
A better genomic interval that is compatible with HTSJDKcoursework
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