There are no reviews yet. Be the first to send feedback to the community and the maintainers!
UniRep
UniRep model, usage, and examples.UniRep-analysis
Analysis and figure code from Alley et al. 2019.low-N-protein-engineering
Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".millstone
Genome engineering and analysis softwareDeep_diversification_AAV
Bioinformatics code for paper associated with deep diversification of AAVAAV_fitness_landscape
Analysis for "Comprehensive fitness landscape of AAV capsid reveals a viral gene and enables machine-guided design"ml-ami-builder
Packer scripts to build nvidia-enabled AMIscrispr-images
Code for Shipman et al. 2017vdj
python package for working with immune receptor sequence dataGenerative_AAV_design
Code and Data for Generative modeling for AAV designoptmage
Scripts for designing oligos and primers for MAGE (Multiplex Automated Genome Engineering)rlr
RLR (Schubert & Goodman et al.) - Documentation, Code, and Figuresagr_recoding
supporting code and data for Napolitano et al.aws-utils
Docs and scripts for working with Amazon Web Services and compute tasks more generallychurchlab.github.io
ulutil
Python utilities for Church lab work (mostly DNA sequencing-related)Vascularized-Organoids
Repository for Vascularized Organoids Paperlac_repression
Code and processed data for Garruss et al. 2021 "Deep Representation Learning Improves Prediction of LacI-mediated Transcriptional Repression"Love Open Source and this site? Check out how you can help us