chrisamiller/rtm-cli

Stars
8
Rank 2,099,232 (Top 42 %)
Language
Perl
Created over 15 years ago
Updated over 15 years ago

chrisamiller/rtm-cli

chrisamiller

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A command-line Remember the Milk client written in perl

fishplot

Create timecourse "fish plots" that show changes in the clonal architecture of tumors

readDepth

R package for inferring copy number from read depth

copyCat

a parallel R package for detecting copy-number alterations from short sequencing reads

igvScreenshot

Create static screenshots of genomic regions using IGV.

docker-genomic-analysis

Basic docker image for ad-hoc genomic analyses

commute-times

calculate drive times from multiple locations and visualize them in google earth

davidapi

A ruby wrapper for a few of the DAVID API functions for functional gene annotation (http://david.abcc.ncifcrf.gov/)

iTunes-to-Guayadeque

copies song ratings from iTunes to Guaydeque music player

docker-R-singlecell

tools for single-cell RNAseq analysis

bioinfoSnippets

Short snippets of code useful for bioinformatics and genomics

docker-phlat

dockerization of phlat hla typing tool

RMEmod

A tool for discovering functional modules by identifying recurrent and mutually exclusive mutational patterns in tumors

docker-meme

docker image for the MEME package (http://meme.ebi.edu.au/)