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coloc
Repo for the R package colocrandom-functions
R functions for which I want some version controlGUESSFM
R package for fine mapping genetic associations in imputed GWAS data.coloc-priors-mask-paper
snphap
Copy of snphap source, written by David Clayton, put here because existing website is closing.coloc-susie-paper
finemap-psa
simple fine mapping script in R used as the basis for analyses in Bowes et. al (2015), Dense genotyping of immune-related susceptibility loci reveals new insights into the genetics of psoriatic arthritis.fm-priors
simulations to consider effect of varying prior distribution and variance in single causal variant fine mappingsimgwas-paper
calculations run for our simGWAS paperslurmer
Interact with slurmchr1swallace.github.io
Group websiteannotSnpStats
repo for R package annotSnpStatsfitmix
fix mixture prior for eqtl effectscaller
cluster beta/gaussian mixture datacondpp
R code used to explore appropriate p value thresholds for calling genetic association in one disease given genomewide significant genetic association at the same SNP in a related disease in the T1D ImmunoChip paper (Onengut et al, in press)PAH-simulations
simulations to examine stratified approach to FDR testing in small numbers of hypotheseswriting
Academic writing stylesdoom
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