• Stars
    star
    1
  • Language
    Nix
  • Created about 6 years ago
  • Updated about 4 years ago

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Repository Details

Overlay for modifications to existing Haskell packages (and potentially more)

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BiobaseFasta

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RNAfold

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GenussFold

MCFGs for Genus-1 RNA Pseudoknots
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BiobaseTypes

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BiobaseBlast

BLAST-related tools
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LinguisticsTypes

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flake-rPackages

experimental flake to repackage rPackages
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ForestStructures

Tree and forest structures in Haskell
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SciBaseTypes

Base types and classes for statistics, sciences and humanities
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OrderedBits

Order bits in a set by population count
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GrammarProducts

Products of linear and context-free grammars
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17

choener.github.io

Homepage Uni Jena
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18

ADPfusionSet

dynamic programming for set data structures
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19

overlay-bioinformatics

nixos package overlays for bioinformatics tools
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DPutils

utilities for DP
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WordAlignment

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ViennaRNA-bindings

Bindings to the ViennaRNA package.
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Forestry

Science and craft of forests
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BiobaseTurner

Turner 2004 energy parameter parser
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flowEMMi

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ghcicabal

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BiobaseFR3D

Importer for FR3D resources
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BenchmarkHistory

Simple Haskell benchmarking system with history
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AlignmentAlgorithms

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flake-aquadiva

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Gene-CluEDO

Gene Cluster Evolution Determined Order
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32

Discretized

Newtypes to generalize discretized floating point numbers
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NaturalLanguageAlphabets

Alphabet and word encodings in natural languages
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overlay-python-packages

overlay with python packages for nixos
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35

ADPfusionForest

Dynamic programming on tree and forest structures
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36

FeatureEngineering

Feature Engineering Examples
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37

overlay-haskell-dev

haskell development related functionality
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38

RNAdraw

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39

Nussinov78

Nussinov78 using the ADPfusion library
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40

BiobaseENA

European Nucleotide Archive data
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flake-statistics

Flakes with a collection of statistical software
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42

InternedData

Internization for (mostly string) data types
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ViennaRNA-extras

ViennaRNA v2 extensions in Haskell
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BiobaseVienna

RNAfold energy tables and Turner 2004 converter
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CMCompare

Comparison of Infernal covariance models
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bimaps

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notmuch.nvim

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ADPfusionSubword

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BiobaseNewick

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