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ontology-mapper
a tool for mapping free-text descriptions of entities to ontology termsBioPlex
R-side access to PPI data from Gygi labnhanes-database
BioPlexAnalysis
Applications and downstream analysis of BioPlex PPI datadocker-rstudio-server
A repository for RStudio Server containers, with the goal of providing multi-architecture (ARM64 and AMD64) images.HarvardInovalonUserGuide
User guide for Harvard's Inovalon resources.computervision
Everything to get started with computer visionphonto
PHenome - PHenome ONTOlogy for NHANESdocker-analytic-workbench
scDiagnostics
Diagnostic functions to assess the quality of cell type annotations in single-cell RNA-seq dataBioPlexPy
Python-side access to PPI data from Gygi labgwasCatSearch
tooling for semantic search of NHGRI GWAS catalogNHANES-metadata
scConform
Uncertainty quantification for cell type annotation using conformal inferenceosca-workbench
Single-cell RNAseq materials derived from the 2023 ISMB OSCA workshop in the carpentries workbench format.HuBMAPy
A package to query the HuBMAP Human Reference Atlas Ontologysystems-immunology-workshops
2023 Workshops to Accompany Systems Immunology Coursehsdm-r-course
Website for materials for the R component of HSDM's Research Design and Analysis CourseCyCIFData
Collection of public CyCIF datasetshmc-clinic-2022-23
HMC clinic project 2022/23nhanes-exploration
Exploring NHANES data through the nhanesA packageworkbench-python-workshop
8-hour workshop introducing Python using The Carpentries new workbench template.MerfishData
Collection of public MERFISH datasetsMouseAgingData
Mouse aging multi-omics project with Rubin LabLove Open Source and this site? Check out how you can help us