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CanlabCore
Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis of neuroimaging data and simple scripts using high-level commands tailored to neuroimaging analysis.Neuroimaging_Pattern_Masks
Brain signature patterns, atlases of regions, and meta-analysis masks for neuroimaging data analysis.MediationToolbox
Single-level and multi-level mediation analyses for any kind of data, with bootstrap-based significance testing. Neuroimaging-oriented functions allow for mediation effect parametric mapping (mapping of mediation effects across the brain) and multivariate mediation.Lindquist_Dynamic_Correlation
Martin Lindquist's dynamic correlation toolboxes. Designed for fMRI analysis, useful for other applications too.CANlab_help_examples
How-to examples and a batch pipeline for second-level neuroimaging analysis. Batch scripts and examples publish HTML files with code and output.Canlab_MKDA_MetaAnalysis
Coordinate-based meta-analysis for neuroimaging using Multilevel Kernel Density Analysis and various other statistical tools (chi-square, clustering, correspondence analysis, parcellation)RobustToolbox
Robust regression toolbox for neuroimaging dataFMRI_simulations
spm12
CanlabScripts
A compilation of useful scripts commonly used in canlabParadigms_Public
Publicly available canlab experimental paradigmspreprocess
All of the preprocessing code2017_kragel_mfc_generalizability_natneurosci
MATLAB code for identifying generalizable brain representations of pain, cognitive control, and negative emotionWAViMedEEG
spm8
Version of SPM8 with the Canlab's internal modificationscognitive_regulation_physiology
Data and scripts for Matthewson, Woo, & Wager (in prep)cantainer
Containerizing the Canlab code2021_Ceko_MPA2_Aversive
Attenuating_neural_threat_expression_with_imagination_2018
data to accompany neuron publication Attenuating neural threat expression with imagination (2018)canlab_single_trials
A repository and data interface for MVPA education and model/algorithm developmentcanlab.github.io
WASABI_public
Public repository for the Warmth, Anticipation, Sensation, Aversion, and Body-part Imaging Study (WASABI)CANLab_PsychoPy_Toolbox
Ease of use PsychoPy Wrappers for efficient creation of CANLab stimulus paradigms in the fMRI scanner2020_Visceral_and_Somatic_Pain
Code used in Van Oudenhove, Kragel, et al. 2020ooFmriDataObjML
Object oriented ML framework for fmri_data objectspetre_scope_of_pain_representation
2021_Koban_NRN_SelfInContext
ANiC.github.io
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