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slendr
Population genetic simulations in R 🌍admixr
An R package for reproducible and automated ADMIXTOOLS analysesdemografr
Fast and simple population genetics inference using tree sequences in Rarchaic-ychr
Repository of code for the paper "The evolutionary history of Neandertal and Denisovan Y chromosomes" by Petr et al.ku-popgen2022
Lecture notes and materials on simulations for the 2022 popgen course at Copenhagen Universityvcf2eigenstrat
A simple shell script for VCF -> EIGENSTRAT conversionnea-over-time
Source code and Jupyter notebooks for the paper: "The limits of long-term selection against Neandertal introgression"adventofcode2021
🎄 Advent of Code 2021 in R 🎄bam-caller
A simple Python CLI program for calling pseudo-haploid genotypes from BAM filesku-popgen2023
Lecture notes and materials on simulations for the 2023 popgen course at Copenhagen Universityprobgen2022
Interactive code examples from the ProbGen 2022 slendr postersmbe2021
Companion repository for the SMBE 2021 poster "A framework for simulating spatio-temporal population genomic data on a real geographic landscape"mpieva-slendr-2023
Gentle introduction to population genetic simulations at MPI EVA (2023)Love Open Source and this site? Check out how you can help us