biopragmatics/debio

Stars
1
Language
Python
License
MIT License
Created over 2 years ago
Updated 7 months ago

biopragmatics/debio

biopragmatics

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

🥮 Decentralized Biomedical Ontology

bioregistry

📮 An integrative registry of biological databases, ontologies, and nomenclatures.

pyobo

📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures

biomappings

🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primary sources.

Jupyter Notebook

bioversions

🪝 What's the latest version for each database?

curies

🐸 Idiomatic conversion between URIs and compact URIs (CURIEs) in Python

bioontologies

🏷️ Unified access to biomedical ontologies

obo-db-ingest

🗄️ Conversion of biomedical nomenclatures like HGNC to OBO

semra

🛣️ Semantic Mapping Reasoning Assembler (SeMRA): tooling for semantic mappings

Jupyter Notebook

oquat

🎬 Ontology Quality Assesment Toolkit

curies.rs

🦀 Idiomatic conversion between URIs and compact URIs (CURIEs) in Rust

biolookup

🔍 The Biolookup Service retrieves metadata and ontological information about biomedical entities.

biolexica

📘 Generate and apply coherent biomedical lexical indices for NER and NEN

Jupyter Notebook