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MolRep
MolRep: A Deep Representation Learning Library for Molecular Property PredictionGraphSite
GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structuresPROTAC-RL
GraphPPIS
SPROF-GO
Fast and accurate protein function prediction from sequence through pretrained language model and homology-based label diffusionHist2ST
DiffDec
STAMP-DPI
MUSE
DRlinker
LMetalSite
LMetalSite: alignment-free metal ion-binding site prediction from protein sequence through pretrained language model and multi-task learningGraphSCI
Imputing Single-cell RNA-seq data by combining Graph Convolution and Autoencoder Neural NetworksGraphEC
GPSite
Geometry-aware protein binding site predictorGraphCS
nucleic-acid-binding
CoSMIG
Communicative Subgraph Representation Learning for Multi-Relational Inductive Drug-Gene Interaction PredictionGraphBepi
GraphSCC
single-cell RNA-seq clusteringGraphEBM
ConGI
SANGO
The official implementation for "SANGO".scAdapt
TransEPI
Enhancer-promoter interaction modelLMDisorder
Meta-MO
CellFM
ADClust
A parameter-free clustering method for single-cell dataDeepMutSol
DeepBayesianCox
MTDsite
Predicting binding sites through multiple-task deep neural networksCMPRY
GP-nano
GP-nano: a geometric graph network for nanobody polyreactivity predicitonSCHAP
MSASC
A few codes of our method from method darn (github.com/junfengwen/DARN)MeHi-SCC
Hierarchical scRNA-seq clusteringscFPN
ML-GVP
The CAGI6-Sherloc modelDrugVNN
ProTact
DeepEPI
Capturing large genomic contexts for accurately predicting enhancer-promoter interactionsLove Open Source and this site? Check out how you can help us