bioimage-io/bioimageio-colab bioimage-io/bioimageio-colab

Twitter logo Share LinkedIn logo Share Facebook logo Share
bioimage-io/bioimageio-colab
github

bioimage-io

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Collaborative image annotation and model training with human in the loop

More Repositories

1

bioimage.io

Website for the BioImage Model zoo -- a model zoo for bioimage analysis.
CSS
54
star
2

bioimageio-chatbot

Your Personal Assistant in Computational Bioimaging.
Jupyter Notebook
31
star
3

JDLL

The Java library to run Deep Learning models
Java
29
star
4

core-bioimage-io-python

Python libraries for loading, running and packaging bioimage.io models
Jupyter Notebook
28
star
5

spec-bioimage-io

Specification for the bioimage.io model description file.
Python
18
star
6

bioimage-io-resources

Model repository for bioimage.io
16
star
7

napari-bioimageio

Python
7
star
8

bioengine

Jupyter Notebook
6
star
9

collection-bioimage-io

(deprecated in favor of bioimage-io/collection) RDF collection for BioImage.IO
Python
5
star
10

AdvanceImageAnalysisEMBO2023

4
star
11

Workshop-June2024-Madrid

Repository for hosting all resources and details related to the AI4Life and BioImage Model Zoo workshop scheduled for June 2024 in Madrid.o
Jupyter Notebook
4
star
12

bioengine-model-runner

Python
3
star
13

workflows-bioimage-io-python

BioImage.IO Workflow definitions and implementations. This library extends the functionality of the BioImage.IO Core library.
Python
3
star
14

tensorflow-1-java-interface

Java
2
star
15

bioimageio-monai

MONAI - BioImage Model Zoo specifications translation. The aim of this repo is to build a programmatic translation that takes MONAI models and converts them into a BioImage.IO compatible format.
Python
2
star
16

tensorflow-2-java-interface

Java
2
star
17

use-cases

Drafting the use-cases for the publication
Python
2
star
18

core-bioimage-io-java

Java specific core utilities for interpretation of specification files of the bioimage model zoo
Java
2
star
19

PredictorOp

Java
2
star
20

pytorch-java-interface

Java
1
star
21

onnx-java-interface

Java
1
star
22

bioimageio-napari

A library for running bioimage.io models in napari
1
star
23

fiji-bioimage-io

1
star
24

tensorflow-2-java-interface-0.2.0

Java
1
star
25

bioimageio-uploader

Svelte
1
star
26

bioengine-web-client

Web Client for running models via the BioEngine
JavaScript
1
star