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adam
ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.mango
A scalable genome browser. Apache 2 licensed.avocado
A Variant Caller, Distributed. Apache 2 licensed.bdg-formats
Open source formats for scalable genomic processing systems using Avro. Apache 2 licensed.cannoli
Distributed execution of bioinformatics tools on Apache Spark. Apache 2 licensed.eggo
Ready-to-go Parquet-formatted public 'omics datasetsrice
An RNA pipeline built on top of ADAM. Apache 2 licensed.utils
General utility code used across BDG products. Apache 2 licensed.awesome-adam
Awesome list of applications that extend Big Data Genomics ADAM. CC0 licensed.bigdatagenomics.github.io
Web Site for the Big Data Genomics Groupgnocchi
workflows
Toil workflows for bigdatagenomics tools. Apache 2 licensed.bdg-services
Utility classes for wrapping services or other interfaces around a Spark/ADAM cluster. Apache 2 licensed.lime
Distributed Set Theory for Genomicsrecipes
Recipes using BDG projects. Apache 2 licensed.PacMin
Assembler for PacBio reads. Apache 2 licensed.quinine
A refreshing treatment for all quality control ailments. Apache 2 licensed.jenkins-docker
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