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bcbio-nextgen
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysisbcbio-nextgen-vm
Run bcbio-nextgen genomic sequencing analyses using isolated containers and virtual machinesbcbio_validations
Validation runs using bcbio: germline, somatic, structural variant calling and RNA-seq analysesbcbio.variation.recall
Parallel merging, squaring off and ensemble calling for genomic variantsbcbio_validation_workflows
A community menagarie of automated variant validations using bcbio and the Common Workflow Languagebcbio.github.io
Blue Collar Bioinformatics websitebcbio_docker
Automated Docker builds for bcbiotest_bcbio_cwl
Test workflows, run scripts and data for bcbio Common Workflow Language integrationicr142-validation
Preparation scripts and bcbio integration for the ICR142 NGS validation seriesbcbio-dnanexus-wrapper
Repository to hold wrapper apps for bcbio CWL on DNAnexusbcbio-utils
Helper scripts for bcbio-nextgenbcbio_rnaseq_output_example
example of bcbio RNAseq output to test bcbioRnaseq R packagebcbioR
R package with well defined templates for most common pipelinesLove Open Source and this site? Check out how you can help us