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RamanSPy
RamanSPy: An open-source Python package for integrative Raman spectroscopy data analysishcga
Highly Comparative Graph Analysis - Code for network phenotypingPyGenStability
PyGenStability: Multiscale community detection with generalized Markov StabilityICE-NODE
Integration of Clinical Embeddings with Neural ODEsDynGDim
Dynamic Graph Dimensionality is a methodology for computing the relative, local and global dimension of complex networks.MultiscaleCentrality
Graph centrality is a question of scale - Multiscale centrality (MSC) is a scale dependent measure of centrality on complex networks.GDR
Graph Diffusion Reclassification - Code from the paper "Semi-supervised classification on graphs using explicit diffusion dynamics" by RL Peach, A Arnaudon and M Barahona, Foundations of Data Science 2 (1), 19-33 (2020)GraphBasedClustering
Multiresolution clustering of data using geometric graphs --- Code from "Graph-based data clustering via multiscale community detection" by Z Liu and M Barahona, Applied Network Science, 5 (3) (2020). See also: https://wwwf.imperial.ac.uk/~mpbara/Partition_Stability/THOR-1
Code for https://arxiv.org/abs/2301.00790POPs
POPs: Propensity Optimised PathsTHOR-2
Code for https://arxiv.org/abs/2303.07925Dynamic-contact-infection-forecast
Dynamic forecasting model using contact patterns to predict disease.MCF
Code for the paper "Persistent Homology of the Multiscale Clustering Filtration" by Dominik J. Schindler and Mauricio Barahona: https://arxiv.org/abs/2305.04281severability
Code for the severability component quality functionRMST
dHSIC_ts
Higher order interactions python packagestreitberg-interaction
Repository for 'Interaction Measures, Partition Lattices and Kernel Tests for High-Order Interactions'numerai-thesis
Source code used in thesis for Numerai projectLove Open Source and this site? Check out how you can help us