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dynamo-release
Inclusive model of expression dynamics with conventional or metabolic labeling based scRNA-seq / multiomics, vector field reconstruction and differential geometry analysesspateo-release
Spatiotemporal modeling of spatial transcriptomicsScribe-py
Regulatory networks with Direct Information in pythondynamo-tutorials
Tutorials on using latest dynamo packagedynast-release
Inclusive and efficient quantification of labeling and splicing RNAs for time-resolved metabolic labeling based scRNA-seq experimentsspateo-viewer
Web application demonstrating 3D modeling of spatial transcriptomicsspateo-tutorials
tutorials for spateo packagedynamo-notebooks
Tutorials of Dynamo usage cases and code to reproduce the manuscriptScribe-Python-notebooks
Tutorials of Scribe Python package usage casesstereo-seq-with-dynamo
notebooks that use dynamo to analyze the Stereo-seq datasetsCSP4ML
repo for modeling and analyzing metabolic labeling dataLove Open Source and this site? Check out how you can help us