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vdjdb-db
🗂️ [vdjdb.cdr3.net is up and running] Git-based TCR database storage & management. Submissions welcome!vdjmatch
⚙️ Matching T-cell repertoire against a database of TCR antigen specificitiesvdjviz
⚙️ A lightweight immune repertoire browservdjdb-web
Interactive browser for the VDJdb databasetcr-annotation-methodology
📝 [Paper/Tutorial] T-cell repertoire annotation and motif discoverytcren-ms
📝 [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potentialrepseq-annotation-tutorial
📝 [Tutorial] RepSeq data mining basics in Rrepseq-protocol-comparison
📝 [Paper] Comparative analysis of immune repertoire profiling protocolsvdjdb-motifs
⚙️ Motif inference for the VDJdb databasevdjdb-classifier-benchmark
tcr-pmhc-study
Mining TCR:pMHC structural dataipred
Antigen immunogenicity predictionsegment-parser
A parser for immune receptor gene data, mainly IMGT referencesvdjsight
[under development] Next-generation immunome browsertrab-pairing-study
📝 [Paper] Studying pairing preferences between TCR alpha and beta chainsvdjstruct
[DEPRECATED]vdjdb-server
[MOVED/DEPRECATED] See vdjdb-web repository for latest versioncovid19-tcr-analysis
Identification and analysis of TCR motifs specific to SARS-CoV-2 epitopespublic-epitope
📝 [Paper] Exploring the landscape of specific TCR precursor frequenciespyigmap
A smart wrapper for V(D)J mapping softwarebiohack-2018
Data & analysis for biohack-2018 projecttcr-thymic-selection
Network properties of public TCRsbootcamp
Pre-employment assessmentstcr-cdr-loop-model
[DEPRECATED]mist
[DEPRECATED]bioinf-cov-classifier
Classifying the status of COVID samples and SARS-CoV2-specific TCRsLove Open Source and this site? Check out how you can help us