andreped/vsi2tif

Stars
3
Rank 3,963,521 (Top 79 %)
Language
Python
License
MIT License
Created almost 4 years ago
Updated about 2 years ago

andreped/vsi2tif

andreped

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Simple method for converting the CellSens .vsi format to a pyramidal .tif

NoCodeSeg

🔬 Code-free deep segmentation for computational pathology

Jupyter Notebook

livermask

💥 Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning model

GradientAccumulator

🎯 Accumulated Gradients for TensorFlow 2

fast-stain-normalization

🌟 GPU-accelerated stain normalization command line tool

super-ml-pets

🐢 AI for Super Auto Pets

DMDetect

Code relevant for training, evaluating, assessing, and deploying CNNs for image classification and segmentation of Digital Mammography images

Jupyter Notebook

adverse-events

IEEE BIBM 2021: Bayesian optimization-guided topic modeling for automatic detection of sepsis-related events from free text

PLS-Net

Reimplementation of the PLS-Net architecture used for lung lobe segmentation in CT

DSS

📳 From training and deployment of ViTs to development of real-time cross-platform mobile apps!

IronFlow

📳 IronFlow: Cross-platform mobile app for strength training progress tracking

FP-DSA-plugin

Digital Slide Archive plugin to enable FAST deployment of pretrained CNNs for digital pathology

neukit

🤗 neukit: web application for automatic brain extraction and preoperative tumor segmentation from MRI

t-loss-tf

Robust T-Loss for Medical Image Segmentation with TensorFlow backend

qupath-project-fixer

Simple program that makes it possible to directly run other people's qupath projects, without the need to re-importing all images again.

wsi-visualization-demo

Simple whole slide image rendering in the browser

chatbot-streamlit-demo

Develop accessible ChatBot with Azure OpenAI and Streamlit

vit-explainer

🔥 Demonstrating Explainable AI with Vision Transformer in web app

ReferenceBot

KnowledgeGPT + Azure OpenAI = <3

MelanomAI

melanoma detection using mobile app

herai

Web service for testing AI-based models on your own data

DeepMIL

andreped

My personal repository

NLP-MTL

Example code for training neural networks to solve multiple tasks from free text, using multi-task learning and natural language processing.

qpdata-fixer

Simple program which converts the qpdata-names, such that if they are accessible in QuPath-0.1.2, if they were produced in a newer version

ohif4hf

🤗 Showcasing AI solutions for medical applications in OHIF using Hugging Face

INF1600-ai-workshop

🔥 Workshop in AI Deployment (INF-1600, UiT)