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InstaLooter
Another API-less Instagram pictures and videos downloader.ffpb
A progress bar for ffmpeg. Yay !pronto
A Python frontend to (Open Biomedical) Ontologies.pyrodigal
Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!pyhmmer
Cython bindings and Python interface to HMMER3.fs.sshfs
Pyfilesystem2 over SSH using paramikorich-msa
A Rich renderable for viewing Multiple Sequence Alignments in the terminal.peptides.py
Physicochemical properties, indices and descriptors for amino-acid sequences.lightmotif
A lightweight platform-accelerated library for biological motif scanning using position weight matrices.fs.smbfs
Pyfilesystem2 over SMB using pysmbpyfamsa
Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments.blanket
A simple Rust macro to derive blanket implementations for your traits.pyskani
PyO3 bindings and Python interface to skani, a method for fast genomic identity calculation using sparse chaining.fs.archive
Pyfilesystem2 for various archive filesystemspytrimal
Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. Now with SIMD!pymuscle5
Cython bindings and Python interface to MUSCLE v5, a highly efficient and accurate multiple sequence alignment software.pyfastani
Cython bindings and Python interface to FastANI, a method for fast whole-genome similarity estimation.orthoani
A Python implementation of the OrthoANI algorithm for nucleotide identity measurement.moclo
Modular cloning simulation with the MoClo framework in Pythongb-io.py
A Python interface to gb-io, a fast GenBank parser written in Rust.iocursor
A zero-copy file-like wrapper for Python byte buffers, inspired by Rust's std::io::Cursor.mini3di
A NumPy port of the foldseek code for encoding protein structures to 3di.textwrap-macros
Simple procedural macros to use textwrap utilities at compile time.pymemesuite
Cython bindings and Python interface to the MEME suite, a collection of tools for the analysis of sequence motifs.jinja2-fsloader
A Jinja2 template loader using PyFilesystem2.thunar-torrent-property
A small thunar extension displaying the metadata in a torrent file.nanoset.py
A memory-optimized wrapper for Python sets likely to be empty.uniprot.rs
Rust data structures and parser for the Uniprot database(s).pubchem.rs
Rust data structures and client for the PubChem REST APIpyrodigal-gv
A Pyrodigal extension to predict genes in giant viruses and viruses with alternative genetic code.packageurl.rs
Rust implementation of the Package URL specification.cksfv.rs
A 10x faster drop-in reimplementation of cksfv using Rust and the crc32fast crate.fs.expose
scihub-pubmed-userscript
A GreaseMonkey userscript to add a Full Text Link button redirecting to Sci-Hub on PubMed article pages.pruefung
Redundancy checks in pure Rusttorch-treecrf
A PyTorch implementation of Tree-structured Conditional Random Fields.proteinogenic
Chemical structure generation for protein sequences as SMILES string.opticaldisc
Read optical media filesystems with Rustlapucelle-textures
A PPSSPP texture pack for La Pucelle Ragnarok (english patched)kmachine
A toy compiler that produces Kappa code from Counter Machine instructions.flips.rs
Rust bindings to Flips, the Floating IPS patcher.pyswrd
Cython bindings and Python interface to SWORD (Smith Waterman On Reduced Database), a heuristic method for fast database search.nafcodec
Rust coder/decoder for Nucleotide Archive Format (NAF) files.embedded-picofont
The PICO-8 font to use with embedded-graphics.pyjess
Cython bindings and Python interface to Jess, a 3D template matching software for protein structures.annotate.Snakefile
A Snakemake pipeline to copy annotations between GenBank filessmatrix
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