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swan_genome_annotation
maker3 annotation for swan genomes using the transcriptomic evidence, homology evidence and de novo predictionGene_family_evolution_in_swans
The gene family evolution in swans with OrthoFinder/CAFE5Synteny-analysis-with-progressiveCactus-and-Mummer
This pipeline describes the method of multiple avian genome analysis and synteny analysisMHC_complex_annotation_of_swans
This pipeline describes on how to annotate MHC class I and II genes in both mute swan and black swanBlack_swan_genome_assembly
This repository contains the scripts used for black swan (Cygnus atratus) genome assembly using PacBio long reads sequence data. The black swan gneome was constructed as a part of a project investigating genesis and pathogenesis of highly pathogenic avian influenza in Australian black swans. The study was conducted at the University of Queensland, St. Lucia, Queensland, 4027.Love Open Source and this site? Check out how you can help us