acorg/py3seq acorg/py3seq

  • Stars
    star
    1
  • Language
    Python
  • License
    MIT License
  • Created almost 6 years ago
  • Updated over 5 years ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
acorg/py3seq
github

acorg

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Python wrapper for the 3seq recombination detection algorithm

More Repositories

1

slurm-pipeline

A Python class for scheduling SLURM jobs
Python
56
star
2

Racmacs

Racmacs R package for performing antigenic cartography
JavaScript
20
star
3

dark-matter

Virus discovery
Python
15
star
4

beast2-xml

Python code to generate BEAST2 XML files
Python
15
star
5

figtree-recolor

A script to re-color a FigTree saved Nexus file
Python
11
star
6

ncbi-taxonomy-database

How to make a mysql or sqlite database of NCBI taxonomy data for use with the dark-matter lineage fetcher
Shell
7
star
7

accourse2019

Repository for course materials for the antigenic cartography and antibody landscapes course 2019
R
6
star
8

pymds

Metric multidimensional scaling in python
Python
4
star
9

acmacs-build

Makefile
2
star
10

gor4

Python class providing an interface to GOR4 amino acid structure prediction C code
C
2
star
11

acmacs-py

Python module for acmacs
Python
2
star
12

simple-slurm-loop

Simple shell scripts to run a looping job on SLURM
Shell
2
star
13

ablandscapes

An R package for making antibody landscapes
R
2
star
14

light-matter

The lighter side of the dark side
Roff
2
star
15

mapping_SARS-CoV-2_antigenic_relationships_and_serological_responses

HTML
1
star
16

acutilsLite

R
1
star
17

cdplot

BLAST hit plotter for CD
JavaScript
1
star
18

parvo-2018

FASTA alignments and BEAST2 XML files for the PNAS paper "Ancient human parvovirus B19 in Eurasia reveals its long-term association with humans"
1
star
19

roessler_netzl_et_al2023

This repository contains the code for the manuscript "Characterizing SARS-CoV-2 neutralization profiles after bivalent boosting using antigenic cartography" by Annika Rรถssler, Antonia Netzl, et. al., 2023
JavaScript
1
star
20

2018-cambridge-python-course

Notes and code from a May 2018 course on Python and the shell
Python
1
star
21

lispmds

LispMDS
Common Lisp
1
star
22

acmacs.r

Acmacs package for R
C++
1
star