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fswatch-rsync
Watches and synchronizes a local folder with a remote folder via another server over sshcomboFM
Machine learning framework for predicting the responses of drug combinations in pre-clinical studies, such as those based on cell lines or patient-derived cells.cca-tutorial
Worked examplesgradKCCA
Implementations of gradKCCAmetaCCA-matlab
pairwiseMKL
pairwiseMKL packagemsms_rt_score_integration
Code, Data and Results of the publication: "Probabilistic Framework for Integration of Tandem-Mass Spectrum and Retention Time Information in Small Molecule Identification" by Bach et al. 2020msms_rt_ssvm
Implementation of the LC-MS²Struct model published in the manuscript "Joint structural annotation of small molecules using liquid chromatography retention order and tandem mass spectrometry data" by Bach et al.GO-LTR-prediction
Protein function prediction through latent tensor reconstructionscca-hsic
MATLAB implementation of SCCA-HSICretention_order_prediction
Code, Data and Results of the publication: "Liquid-Chromatography Retention Order Prediction for Metabolite Identification" by Bach et al. 2018lcms2struct_exp
Scripts to run the experiments and analysis for the publication "Joint structural annotation of small molecules using liquid chromatography retention order and tandem mass spectrometry data" by Bach et al.fingerid
Molecular fingerprint prediction from MS/MSPMFA
Principal Metabolic Flux Mode Analysisprimal_dual_scca
Implementation of the Primal-Dual Sparse Canonical Correlation AnalysissoftALIGNF
ALIGNF+ (soft ALIGNF) python implementation.molecular_classification
Structured output learning method for multilabel molecular activity classification problem.L2RTA
http://hongyusu.github.io/L2RTA/MKC
Multi-view Kernel CompletioncomboKR
comboKR for predicting drug combination response surfacesComboLTR
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