Ziaeemehr/ReScience

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Created over 3 years ago
Updated over 3 years ago

Ziaeemehr/ReScience

Ziaeemehr

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My Reproduction of the papers.

mndynamics

A python package for An Introduction to Modeling Neuronal Dynamics by Christoph Borgers

Jupyter Notebook

signal_processing

Fourier transform, wavelet transform, time frequency analysis

Jupyter Notebook

JITCSIM

Simulation of complex network dynamics with Ordinary/Delay/Stochastic differential equations (just-in-time compilation)

Kuramoto_model

cpp_workshop

Scientific programming toolbox with C++

workshop_scripting

Scientific programming toolbox with python

Jupyter Notebook

workshop_brian

Jupyter Notebook

itng_nest

Nest Simulator quick guides and examples, adding new model using NESTML

netsci

Network Science by Albert-László Barabási notes

workshop_julia

Julia tutorial examples, binding with python. Practical examples in modeling the dynamical systems.

Jupyter Notebook

covid19_statistics

some statistics on Covid-19 datasets

03_Digraph_FARSI

brian_dash

Brian2 Dashboard

CMNM

numerical methods in condensed matter Autumn 93

swig

sample examples using swig for mix programming of python and C++

bash_scripting

simple examples to use bash scripts

NA

Numerical Analysis Practice

DDA

My dda code for master

ode_solver

ode/sde solver, using boost odeint, scipy, gsl, sde.

SReport2020

Abolfazl, Z., Mina, Z. and Aida, S., 2020. Emergence of global synchronization in directed excitatory networks of type I neurons. Scientific Reports (Nature Publisher Group), 10(1).

solvers

Different methods to solve system of equations (sparse, ill-conditioned, ...)

Jupyter Notebook

spikes

Python/JAX code for Spikes, decisions, and actions, Wilson, 1999