YongxinLiu/Metagenome

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Created about 6 years ago
Updated almost 3 years ago

YongxinLiu/Metagenome

YongxinLiu

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Metagenome analysis pipeline

MicrobiomeStatPlot

Interpretation and visualization of microbiome charts

QIIME2ChineseManual

QIIME 2中文文档(QIIME 2 Chinese Manual)

EasyAmplicon

Easy Amplicon data analysis pipeline

EasyMetagenome

Easy Metagenome Pipeline

Note

MicrobiomeProtocol

Microbiome Protocol eBook related documents and scripts.

EasyMicrobiome

Scripts and databases for amplicon and metagenome

Zhang2018SCLS

Rice (Oryza Sative) root microbiome time-course analysis. (Zhang2018SCLS)

Liu2020ProteinCell

Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome

Amplicon2017

Data and scripts for amplicon pipeline

Zhang2019NBT

Scripts for stat and plot figures in rice microbiome paper

Culturome

UsearchChineseManual

USEARCH中文帮助文档(USEARCH Chinese manual)

Amplicon2022

High throughput sequencing -- Amplicon sequencing, mainly include 16S, 18S and ITS for microbiome analysis

RiceMinicoreSL

Huang2019SCIENCE

Scripts for Arabidopsis triterpene

WheatFHB

Wheat perithecia 16S amplicon

Chen2019SCLS

Arabidopsis Sesterterpene Modulate Root Microbiota related data and scripts

Work

Qian2020CMJ

Scripts for Chinese Medical Journal