VoigtLab/constr-peptide-paper-figs

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Created about 3 years ago
Updated about 3 years ago

VoigtLab/constr-peptide-paper-figs

VoigtLab

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Code used to generate plots in "Selection for constrained peptides that bind to a single target protein" Andrew M. King, et al.

dnaplotlib

DNA plotting library for Python

predict-lab-origin

Software for article "Deep learning to predict the lab-of-origin of engineered DNA"

MIT-BroadFoundry

Tools developed as part of the MIT-Broad Foundry for Synthetic Biology

Comprehensive_Genetic_Circuit_Analysis

Files accompanying Espah Borujeni, et al. (2020)

biofilms

Files accompanying Moser, et al. (2019) Biofilm paper

promoter-library-design-tool

Relevant files for Moser, et al (2018). Dynamic control of endogenous metabolism with combinatorial logic circuits.

Promoter_Activity_Quantification

Files accompanying Shao, et al. (2020)

ripp-design

Jupyter notebooks and associated data for designing enzyme-modified peptides

Jupyter Notebook

plant-microbe-communication

Files accompanying Boo and Toth et al. (2023)