• Stars
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    3
  • Rank 3,963,521 (Top 79 %)
  • Language
    JavaScript
  • Created over 9 years ago
  • Updated over 5 years ago

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Repository Details

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1

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Code and data for the RNAML paper
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ernwin

Sample and predict coarse grain 3D RNA structures
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RNAxplorer

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Interactive visualization of cotranscriptional folding
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Treekin

Compute folding dynamics on coarse grained version of an energy landscape by numeric integration of a Markov process
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RNAforester

A tool for aligning RNA secondary structures. It's user interface integrates to those of the tools of the ViennaRNA Package (http://www.tbi.univie.ac.at/RNA/).
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pourRNA

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Compute local minima and energy barriers of a landscape
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Kinwalker

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RNA folding with soft constraints
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dotstruct

An enhanced RNA dotplot showing the associated structures.
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21

ViennaRNA-perl

Additional Perl modules living in the namespace RNA. They augment the Perl 5 wrapped libRNA C-library of the ViennaRNA Package and are usually included in the ViennaRNA Package distribution.
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RNAPLfold revisited
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VEEnext

Nextstrain community build 'Molecular epidemiology of Venezuelan equine encephalitis complex viruses'
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