• Stars
    star
    27
  • Rank 900,910 (Top 18 %)
  • Language
    Java
  • License
    GNU General Publi...
  • Created over 11 years ago
  • Updated about 8 years ago

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

A configurable de novo assembly pipeline

More Repositories

1

KAT

The K-mer Analysis Toolkit (KAT) contains a number of tools that analyse and compare K-mer spectra.
C++
200
star
2

361Division

361 Division - Scientific Training, Education and Learning
R
28
star
3

kontaminant

Tool to look for contaminants, with a kmer database.
C
15
star
4

earlham-galaxytools

Galaxy tools and workflows developed at the Earlham Institute
Python
14
star
5

TGACBrowser

TGAC's Genome Browser
JavaScript
10
star
6

statsdb

StatsDB
Perl
9
star
7

lncRNA-analysis

Python
7
star
8

Aequatus

Earlham Institute's Synteny Browser
JavaScript
7
star
9

brassica

Brassica Information Portal
Ruby
6
star
10

MultiPEN

MATLAB
3
star
11

SHSY5Y_differentiation

Scripts and data files accompanying Wright et al
R
2
star
12

grassroots-service-polymarker

The Polymarker service for the Grassroots infrastructure.
C
2
star
13

grassroots-service-field-trial

A Grassroots service for storing the data for field trials
C
2
star
14

irods_bash_completer

A tool to allow the iRODS client icommands to have auto-complete functionality within Bash
C
2
star
15

grassroots-service-field-pathogenomics

The Grassroots service for geolocation and dates of samples of crop pathogenomic data
C
2
star
16

Mulea

R
2
star
17

COPO-documentation

COPO documentation was created using the Sphinx reStructuredText (reST) markup language which is hosted on readthedocs.io. The documentation uses Sphinx.
Python
2
star
18

grassroots-service-blast

The BLAST services for the Grassroots infrastructure
C++
2
star
19

grassroots-client-frictionless-data

A tool to extract the resources from a Grassroots Frictionless Data Package
C
2
star
20

grassroots-api

The Grassroots API - lightweight infrastructure for data federation, analysis and search
JavaScript
2
star
21

2016-03-08-TGAC

Python
2
star
22

Aequatus-Docker

1
star
23

grassroots-core

The core libraries of the Grassroots infratructure
C
1
star
24

SalmoNet

SalmoNet website
CSS
1
star
25

2023-02-07-earlham

https://tgac.github.io/2023-02-07-earlham/
HTML
1
star
26

Mozfest2015

Python/Django skeleton project for user driven ontology creation session at Mozfest2015
Python
1
star
27

BIP_training

Ruby
1
star
28

SapioExpampleProject

Earlham Data Portal
Python
1
star
29

knowledge_base

EI specific documentation (induction materials, tool/method specific advice); contributions made by EI users.
1
star
30

COPO-production

mainline production repository for COPO
JavaScript
1
star