SydneyBioX/scClassify SydneyBioX/scClassify

  • Stars
    star
    20
  • Rank 1,121,974 (Top 23 %)
  • Language
    R
  • Created about 5 years ago
  • Updated about 3 years ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
SydneyBioX/scClassify
github

SydneyBioX

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Hierarchical classification of cells

More Repositories

1

scMerge

Statistical approach for removing unwanted variation from multiple single-cell datasets
R
65
star
2

scJoint

Jupyter Notebook
55
star
3

BIDCell

Biologically-informed deep learning for cell segmentation of subcelluar spatial transcriptomics data
Python
35
star
4

CiteFuse

CiteFuse:
R
26
star
5

MoleculeExperiment

R
11
star
6

SimBench

R
11
star
7

scFeatures

R
10
star
8

scReClassify

Post hoc cell type classification of single-cell RNA-sequencing data.
R
9
star
9

spicyR

R
8
star
10

scDC

R
7
star
11

SurvBenchmark

R
5
star
12

scTIE

Jupyter Notebook
5
star
13

spicyWorkflow

Perform spatial analysis of in situ cytometry data in R
4
star
14

hRUV

R
4
star
15

CellSPA

Cell Segmentation Performance Assessment
R
4
star
16

lisaClust

R
3
star
17

GHIST

Python
3
star
18

scdney

TeX
2
star
19

RNASeq

Pipelines for processing RNASeq and scRNAseq data
R
2
star
20

scREMOTE

scREMOTE: a single cell REprogramming Model Through CREs
2
star
21

StatialBioc2023

R
2
star
22

Unlocking-single-cell-spatial-omics-analyses-with-SCDNEY

HTML
1
star
23

CiteFuse2020Kim

HTML
1
star
24

tidy2019

Tidyverse workshop at BioinfoSummer 2019
CSS
1
star
25

eNODAL

eNODAL package
R
1
star
26

scdneySpatialOmics_BIS22

HTML
1
star
27

BIS2019_SC

Single-Cell RNA-Seq workshop, Bioinformatics Summer 2019
HTML
1
star
28

BIS2019_IntroUnix

Bioinfosummer 2019 Unix workshop
1
star
29

BIS2019_PhosR

PhosR workshop
HTML
1
star
30

COVID_CCI_analysis

HTML
1
star
31

SimBenchData

R
1
star
32

localWorkshop

Workshop Slides and Website for Cross-validated Classification Workshop Held on 29 June 2018 in Sydney
HTML
1
star
33

WholeGenomeDNA

A set of scripts to process whole genome sequencing DNA data on a PBS Cluster
Shell
1
star
34

simpleSeg

R
1
star
35

scClassify_analysis

HTML
1
star
36

SC_CPC_workshop

CPC Single Cell Workshop, 04 Nov 2019
HTML
1
star
37

sc_bench_benchmark

R
1
star
38

Statial

R
1
star
39

scdneySpatialOmics_CPC23

HTML
1
star