SilkeAllmannLab/gwas

This repository has been archived on 14/Feb/2022
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Created almost 5 years ago
Updated about 3 years ago

SilkeAllmannLab/gwas

SilkeAllmannLab

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R-based pipeline/script to implement a Genome-Wide Association Study (GWAS) analysis based on the RAINBOWR package

snakemake_bsaseq

A Snakemake pipeline to perform BSA-seq to identify causal the recessive mutation(s) underlying a mutant phenotype

pacbio_snakemake

A Snakemake pipeline to go from raw .subreads.bam PacBio Iso-Seq to assembled mRNA isoforms (FASTA format)